NCH1_chunk_M.markdup.sorted.bam
syn52054643
Created By
Robert Allaway allawayr
assay: RNA-seq
tissue: unspecified
species: Homo sapiens
studyId: syn51907739
cellType: schwann
dataType: AlignedReads
platform: Illumina NovaSeq 6000
workflow: STAR and Salmon
Component: RNASeqTemplate
aliquotID: NCH1 chunk M
diagnosis: Schwannomatosis
studyName: Bromodomain Inhibitors to Prevent Development of Resistance to Targeted Kinase Inhibitors in Schwannomas
tumorType: Schwannoma
fileFormat: bam
initiative: Investigator-Initiated Research Award
isCellLine: Yes
specimenID: NCH1 chunk M
totalReads: 61330548
dataSubtype: processed
nf1Genotype: Unknown
nf2Genotype: +/-
individualID: NCH1
resourceType: experimentalData
fundingAgency: Other
isPrimaryCell: No
modelSystemName: NCH1
genomicReference: GRCh38
parentSpecimenID: NCH1 chunk M
averageInsertSize: 1805.5
averageReadLength: 149
averageBaseQuality: 36
readsMappedPercent: 100
pairsOnDifferentChr: 0
readsDuplicatedPercent: 51.2857866523547
specimenPreparationMethod: Fresh collected
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