In terms of assessment, could you provide the code (or R package) that you will use to compute the AUPR and AUROC?
My experience is that different R packages may not produce the same AUPR and AUROC depending on how interpolation is done. So, I'd greatly appreciate the "official" version.
Thank you,
Ka Yee Yeung
Associate Professor, Institute of Technology, UW-Tacoma
Created by Ka Yee Yeung kayee Participants-
We have fixed a bug in the AUPR code relating to the Recall starting at 1/n instead of zero. The updated code is in the same location in Synapse. If you have previously downloaded this file, please be aware that you will need download an updated version. Sorry for any inconvenience this may have caused. We have made the AUROC and AUPR scoring functions available: https://www.synapse.org/#!Synapse:syn6113035. They are written in Python, but you can either re-implement the algorithm in R or call Python from within R if you need.