Hi all:
Our team encounter some empty download threads when using the python download script.
```
folder_ids = ['syn6181334', 'syn6181335', 'syn6181336', 'syn6176232', 'syn6176233', 'syn6176234', 'syn6176231']
```
We discovered that the download threads for ChIP-seq peaks (syn6181336) and DNASE-peaks (syn6176234) will get nothing.
Then we change the IDs into their sub-directory IDs, ChIP-seq (syn6181337, syn6181338) and DNASE-peaks (syn6176235, syn6176236) and it works!
If someone tries to use the python script to download the data, you might need to modified the script for the above-mentioned issues.
.
And we are also wondering about if the data in the **four directories are as the same as the four tar files**?
Hope everyone can get the data downloaded successfully!
.
Best,
Yi-an
Created by Yi-An Tung yat Hi Jim:
Got it! Thanks for your help!
Cheers,
Yi-An Hi Yi-an,
Just to complete the thread here for everyone's benefit. The scripts were updated this morning to reflect the correct folder ids, so everything should work if you re-download the updated scripts.
Cheers,
Jim
Hi Yi-An,
thanks for your note!
_And we are also wondering about if the data in the four directories are as the same as the four tar files?_
The tar files are meant to contain the same data, so that its easier to download this data manually.
To be precise: the tar files include everything but the DNase BAMs, which represent the largest amount of the provided data, and they might not be necessary for many approaches.
About your other question, I will check and answer when I am back in the office tomorrow.
Cheers,
Robert
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