Hi,
Am I correct in assuming that for the the across-cell type ladderboard round, we only need to submit 28 files? Namely
[1] "L.ARID3A.K562.tab.gz"
[2] "L.ATF2.K562.tab.gz"
[3] "L.ATF3.liver.tab.gz"
[4] "L.ATF7.MCF-7.tab.gz"
[5] "L.CEBPB.MCF-7.tab.gz"
[6] "L.CREB1.MCF-7.tab.gz"
[7] "L.CTCF.GM12878.tab.gz"
[8] "L.E2F6.K562.tab.gz"
[9] "L.EGR1.K562.tab.gz"
[10] "L.EP300.MCF-7.tab.gz"
[11] "L.FOXA1.MCF-7.tab.gz"
[12] "L.GABPA.K562.tab.gz"
[13] "L.GATA3.MCF-7.tab.gz"
[14] "L.JUND.H1-hESC.tab.gz"
[15] "L.MAFK.K562, MCF-7.tab.gz"
[16] "L.MAX.MCF-7.tab.gz"
[17] "L.MYC.HepG2.tab.gz"
[18] "L.REST.K562.tab.gz"
[19] "L.RFX5.HepG2.tab.gz"
[20] "L.SPI1.K562.tab.gz"
[21] "L.SRF.MCF-7.tab.gz"
[22] "L.STAT3.GM12878.tab.gz"
[23] "L.TAF1.HepG2.tab.gz"
[24] "L.TCF12.K562.tab.gz"
[25] "L.TCF7L2.MCF-7.tab.gz"
[26] "L.TEAD4.MCF-7.tab.gz"
[27] "L.YY1.K562.tab.gz"
[28] "L.ZNF143.K562.tab.gz"
Created by Rick Farouni rfarouni
Sorry I missed that. 29 then. MAFK requires 2 separate files for 2 cell-lines
"L.MAFK.K562, MCF-7.tab.gz" should be
"L.MAFK.K562.tab.gz"
"L.MAFK.MCF-7.tab.gz"