Are gene expression counts available for validation?

Hi In training data we get access to count and TPM gene expression. DO we get access to count expression as well in validation or only TPM? thanks DA

Created by exquirentibus veritatem exquirentibus
ok thanks The reason I ask is that most between-sample normalization algorithms (like TMM and DeSeq normalization) require the counts. I think it would be helpful to provide this at validation
Currently there are only transcript and gene level TPM data available for the validation cohorts.

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Hi In training data we get access to count and TPM gene expression. DO we get access to count expression as well in validation or only TPM? thanks DA

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