In mmrf.clinical file there are clinical data for 653 patients with RNA-seq information, and in sc2_Training_ClinAnnotations file, there are only 632 patients with RNA-Seq data, the 21 missing patients appear to not have the gender information, can we get an update for the missing information? Thanks, Ilyes

Created by Baali Ilyes ilyes
The MMRF dataset has samples that have WES and RNA-Seq and samples that have one but not the other. You are seeing this in the mmrf clinical file. I recommend using the challenge question specific annotation file (sc2_Training_ClinAnnotations.csv for example). Not that some samples will be missing age or gender and other clinical features like cytogenetics. Prediction methods need to be robust to missing data. Kind regards, Mike

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