i am absolutely sure i generated the output file as predictions.tsv in the output directory. however it reports: Submission file must be named predictions.tsv

Created by Yuanfang Guan ???? yuanfang.guan
i don't know if that should make any sense to me, because that's always the first file i copy in. i tried to resubmit and debug, but it seems now the lane is completely blocked.
Dear Yuanfang, I looked at your log file of that submission and it looks like this is the error: ``` 404 Client Error: Not Found for url: http+docker://localunixsocket/v1.24/containers/f62d9c7d658b8957e1869932b3e853588f2409b869d39c58f3027c2479860d16/start ("oci runtime error: container_linux.go:247: starting container process caused "exec: \"/score_sc2.sh\": stat /score_sc2.sh: no such file or directory" ") ``` I think you were looking at the log file for submission: `9634441` which is processing ok now. Best, Tom
i found i am having this problem on express lane now: 9634880 it reports 409 Client Error: Conflict for url: http+docker://localunixsocket/v1.24/containers/create?name=9634441 ("Conflict. The container name "/9634441" is already in use by container "2dc4383a7b5b6b45fcb10de1351bd21ff112a44d6701b929925b059b66b4e429". You have to remove (or rename) that container to be able to reuse that name.") Provenance 9634441_log.txt it looks like, i don't have the permission to run my own docker since you changed something? should i just submit two dockers and whenever you fix your side, you just submit for me? or should i wait for a response/a fix?
Dear Yuanfang, My apologies. I think it is finally working now. Sorry about that. Best, Tom
ok. now it says '409 Client Error: Conflict for url: http+docker://localunixsocket/v1.24/containers/create?name=9634441 ("Conflict. The container name "/9634441" is already in use by container "2dc4383a7b5b6b45fcb10de1351bd21ff112a44d6701b929925b059b66b4e429". You have to remove (or rename) that container to be able to reuse that name.") Provenance 9634441_log.txt v.716 Un' just stay still. i will submit myself
you said you resubmitted it, and then i received a confirmation email. but when i checked log it stays at 20 hours ago, is that normal?
Dear Yuanfang, I just resubmitted it. Best, Tom
or if you couldn't find which is which you could just return me the score on expression lane "syn10699269" (ID: 9634308) , they are the same submission. where i know that you have all score.s
please just resubmit it if you could.
Dear Yuanfang, The submission must have died. Did you want me to restart it or did you just want to resubmit? Best, Tom
can you please check the machine that is running this submission maybe its dead? 9634441 the log hasn't updated for 12 hours now.
Dear Yuanfang, Yes this is resolved across all lanes now. Best, Tom
so this is resolved on all lanes? i see this problem across lanes this morning.
Dear Yuanfang, Apologies. I have fixed the issue now. Please try to submit again. Best, Tom
Ok please do not change yet. I am looking into this for multiple participants. This may be a prob on our side.
you mean i should print to /output/ instead of output/? that is really weird because i have been using output/ all time along.
Dear Yuanfang Guan, Your file is called predictions.tsv but the directory structure in your zip follows this hierarchy. home/ubuntu/sc1/Celgene-Multiple-Myeloma-Challenge/docker_agent/output/ I believe the zip needs to be "flat" i.e. having the prediction file at the top level.

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