Hi,
I'm analyzing fusion data from the NSCLC cohort, and noticed that the total number of samples profiled for structural variants/fusions has reduced significantly from v12 to v13. It now looks like only a subset of patients are listed as being sequenced for structural variants, whereas in v12 all the samples were listed as having been profiled for fusions. Any help with understanding this discrepancy is much appreciated.
Best,
Nitya
Created by nitya.sharma Dear @nitya.sharma,
Thank you for your patience.
We have identified this issue and are in discussion with other teams to resolve it upon the next release. The issue comes from the switch from the fusion file format to the structural variant file format.
Let us know if you have any other questions.
Best,
Chelsea Hi @nitya.sharma,
I want to let you know we are working on your question (and I also received your separate email). We will try to get back to you as soon as we can after our investigation.
Best,
Chelsea