Hi All, I have downloaded Genie data and read into SAS. Clinical, sample, fusion, and mutation extended data all are easy to import to SAS.
However, I have difficulty reading CNA data into SAS. Proc import can not handle that many variables so truncated a lot of them.
The infile data setp seemed to be able to read it however there?re some lines are off.
Can someone share a sample codes with me what is the best way to read it?
Thanks
Ruqin
Created by Ruqin Chen Ruchen Dear Ruqin,
Apologies for the delay in response. After downloading the data, using `R`, and the cran `data.table` package you can:
```
library(data.table)
cna = fread("data_CNA_5.0-public.txt")
```
There are also programmatic ways you can parse this file with `Python`.
Best,
Tom
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