What is the best way to seperate MSKCC samples from GENIE?

I would like to separate the MSKCC samples out of the data_mutations_extended.txt file. I'm currently doing this separation by taking out every sample that its value in the 'Tumor_Sample_Barcode' colum contains the string - 'MSK', is that accurate?

Created by linoy_tsaban
Hi, That is one way to do it, but you can also use the 'Center' column and exclude 'MSK' samples. Best, Tom

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I would like to separate the MSKCC samples out of the data_mutations_extended.txt file. I'm currently doing this separation by taking out every sample that its value in the 'Tumor_Sample_Barcode' colum contains the string - 'MSK', is that accurate?

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