How to count the number of mutations of each gene in each tumor?

Hello,As the title says.Thank you!

Created by BetterMan
Hello @BetterMan, To do so, you may need some compute experience (R or Python). You can also explore the data on [cBioPortal](https://genie.cbioportal.org/login.jsp). You will want to join the sample clinical file (data_clinical_sample.txt) with the mutation file (data_mutations_extended.txt) by the sample column (SAMPLE_ID, Tumor_Sample_Barcode). You can then group by `ONCOTREE_CODE`, then by get a count of mutations per `Hugo_Symbol`. Best, Tom

Your web browser must have JavaScript enabled in order for this application to display correctly.
If you are an automated web crawler from a search engine, follow this AJAX application crawl link

Hello,As the title says.Thank you!

Drop files to upload

How to count the number of mutations of each gene in each tumor? page is loading…