HS01_CUDC907_Run3_S2_sorted.bam
syn9775803
Created By
Steven Angus angussp
assay: rnaSeq
runType: singleEnd
species: Human
cellType: schwann
dataType: geneExpression
platform: NextSeq500
diagnosis: Neurofibromatosis 2
tumorType: Schwannoma
consortium: Synodos
fileFormat: bam
isCellLine: TRUE
isStranded: TRUE
readLength: 75
specimenID: HS01_CUDC907_Run3_S2
dataSubtype: processed
libraryPrep: polyAselection
nf1Genotype: unknown
nf2Genotype: -/-
compoundDose: 100.0
compoundName: CUDC-907
individualID: HS01
resourceType: experimentalData
fundingAgency: CTF
genePerturbed: NF2
isPrimaryCell: TRUE
structureType: SMILES
timePointUnit: hours
alignmentMethod: GSNAP
compoundDoseUnit: nM
specimenIdSource: UNC
chemicalStructure: CN(Cc1cc2c(s1)c(nc(n2)c3ccc(nc3)OC)N4CCOCC4)c5ncc(cn5)C(=O)NO
individualIdSource: Sage Bionetworks
genePerturbationType: knockdown
cellLineMetadataSynId: syn3275123
experimentalCondition: 100 nM CUDC-907
experimentalTimePoint: 24
specimenMetadataSynId: syn5569975
genePerturbationTechnology: RNAi
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