HS01_GSK2126458_Run1_S3_sorted.bam
syn9777730
Created By
Steven Angus angussp
assay: rnaSeq
runType: singleEnd
species: Human
cellType: schwann
dataType: geneExpression
platform: NextSeq500
diagnosis: Neurofibromatosis 2
tumorType: Schwannoma
consortium: Synodos
fileFormat: bam
isCellLine: TRUE
isStranded: TRUE
readLength: 75
specimenID: HS01_GSK2126458_Run1_S3
dataSubtype: processed
libraryPrep: polyAselection
nf1Genotype: unknown
nf2Genotype: -/-
compoundDose: 100.0
compoundName: Omipalisib
individualID: HS01
resourceType: experimentalData
fundingAgency: CTF
genePerturbed: NF2
isPrimaryCell: TRUE
structureType: SMILES
timePointUnit: hours
alignmentMethod: GSNAP
compoundDoseUnit: nM
specimenIdSource: UNC
chemicalStructure: COc1c(cc(cn1)c2ccc3c(c2)c(ccn3)c4ccnnc4)NS(=O)(=O)c5ccc(cc5F)F
individualIdSource: Sage Bionetworks
genePerturbationType: knockdown
cellLineMetadataSynId: syn3275123
experimentalCondition: 100 nM GSK2126458
experimentalTimePoint: 24
specimenMetadataSynId: syn5569975
genePerturbationTechnology: RNAi
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